Campo DC | Valor | Idioma |
dc.contributor.author | Telles, Guilherme P. | - |
dc.contributor.author | Araújo, Graziela S. | - |
dc.contributor.author | Walter, Maria Emília Machado Telles | - |
dc.contributor.author | Brígido, Marcelo de Macedo | - |
dc.contributor.author | Almeida Júnior, Nalvo Franco de | - |
dc.date.accessioned | 2018-06-26T14:06:21Z | - |
dc.date.available | 2018-06-26T14:06:21Z | - |
dc.date.issued | 2018-05-16 | - |
dc.identifier.citation | Telles, Guilherme P. et al. Live neighbor-joining. BMC Bioinformatics, v. 19, n. 172, 2018. Disponível em: <https://bmcbioinformatics.biomedcentral.com/articles/10.1186/s12859-018-2162-x>. Acesso em: 26 jun. 2018. doi:
https://doi.org/10.1186/s12859-018-2162-x. | pt_BR |
dc.identifier.uri | http://repositorio.unb.br/handle/10482/32105 | - |
dc.language.iso | Inglês | pt_BR |
dc.publisher | BMC | pt_BR |
dc.rights | Acesso Aberto | pt_BR |
dc.title | Live neighbor-joining | pt_BR |
dc.type | Artigo | pt_BR |
dc.subject.keyword | Filogenia | pt_BR |
dc.subject.keyword | Evolução (Biologia) | pt_BR |
dc.rights.license | © The Author(s). 2018 Open Access This article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated. | pt_BR |
dc.identifier.doi | https://doi.org/10.1186/s12859-018-2162-x | pt_BR |
dc.description.abstract1 | Background: In phylogenetic reconstruction the result is a tree where all taxa are leaves and internal nodes are
hypothetical ancestors. In a live phylogeny, both ancestral and living taxa may coexist, leading to a tree where internal nodes may be living taxa. The well-known Neighbor-Joining heuristic is largely used for phylogenetic reconstruction. Results: We present Live Neighbor-Joining, a heuristic for building a live phylogeny. We have investigated Live Neighbor-Joining on datasets of viral genomes, a plausible scenario for its application, which allowed the construction of alternative hypothesis for the relationships among virus that embrace both ancestral and descending taxa. We also applied Live Neighbor-Joining on a set of bacterial genomes and to sets of images and texts. Non-biological data may be better explored visually when their relationship in terms of content similarity is represented by means of a phylogeny. Conclusion: Our experiments have shown interesting alternative phylogenetic hypothesis for RNA virus genomes, bacterial genomes and alternative relationships among images and texts, illustrating a wide range of scenarios where Live Neighbor-Joining may be used. | pt_BR |
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